PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050411.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 107aa    MW: 11755.2 Da    PI: 8.7525
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050411.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.85.9e-063885152
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
           HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52
                  +r  + erE++ R+++N+ f+ L   l  +    ++ + Ka+iL +A + +k
  EcC050411.10 38 KRIHKAEREKQKREHLNELFQDLANALELN----QQNNGKASILCEAARLLK 85
                  688999*********************998....577888889988887766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.06E-1135101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.8493787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-837105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009652Biological Processthigmotropism
GO:0005815Cellular Componentmicrotubule organizing center
GO:0005876Cellular Componentspindle microtubule
GO:0009524Cellular Componentphragmoplast
GO:0009574Cellular Componentpreprophase band
GO:0010005Cellular Componentcortical microtubule, transverse to long axis
GO:0008017Molecular Functionmicrotubule binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MVSEATTSSG DNSNGAAEAS LSAGRSSPCK KTQGKVPKRI HKAEREKQKR EHLNELFQDL  60
ANALELNQQN NGKASILCEA ARLLKEIFGQ IEDLKKENVA LVSESRY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029542.16e-71PREDICTED: transcription factor bHLH47
SwissprotQ9SN749e-37BH047_ARATH; Transcription factor bHLH47
TrEMBLA0A059CZD96e-71A0A059CZD9_EUCGR; Uncharacterized protein
STRINGPOPTR_0015s13260.12e-34(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.35e-29bHLH family protein